############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 14:16:152:153:165:168 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1787 S1_NAME_ID3 = 1792 S1_NUM_ID5_ORIG = 1787 S1_NUM_ID3_ORIG = 1792 S1_NAME2_ID5 = 1788 S1_NAME2_ID3 = 1791 S1_NUM2_ID5_ORIG = 1788 S1_NUM2_ID3_ORIG = 1791 S1_SQ2 = CACA S1_SQLEN2 = 4 S1_SQ = ACACAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1771 S2_NAME_ID3 = 1777 S2_NUM_ID5_ORIG = 1771 S2_NUM_ID3_ORIG = 1777 S2_NAME2_ID5 = 1772 S2_NAME2_ID3 = 1776 S2_NUM2_ID5_ORIG = 1772 S2_NUM2_ID3_ORIG = 1776 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = CGACUGU S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1827 S3_NAME_ID3 = 1830 S3_NUM_ID5_ORIG = 1827 S3_NUM_ID3_ORIG = 1830 S3_NAME2_ID5 = 1828 S3_NAME2_ID3 = 1829 S3_NUM2_ID5_ORIG = 1828 S3_NUM2_ID3_ORIG = 1829 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = CGAC S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1975 S4_NAME_ID3 = 1980 S4_NUM_ID5_ORIG = 1975 S4_NUM_ID3_ORIG = 1980 S4_NAME2_ID5 = 1976 S4_NAME2_ID3 = 1979 S4_NUM2_ID5_ORIG = 1976 S4_NUM2_ID3_ORIG = 1979 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = GUAACG S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1788 H1_OUTID2_ORIG = 1776 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -59.85399760118339 H1_P_Y = -29.057422250275863 H1_P_Z = 5.022237875843646 # Orientation: H1_DX_X = 0.6104112339588781 H1_DX_Y = -0.13147068575296217 H1_DX_Z = 0.7810976790673791 H1_DY_X = -0.778248418040306 H1_DY_Y = -0.2830597908268331 H1_DY_Z = 0.560541305021169 H1_DZ_X = 0.14740259588814553 H1_DZ_Y = -0.9500487427520312 H1_DZ_Z = -0.27509972940866145 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1828 H2_OUTID2_ORIG = 1791 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -61.84683357008947 H2_P_Y = -14.22236670062135 H2_P_Z = 21.28419669425707 # Orientation: H2_DX_X = 0.4439416554145339 H2_DX_Y = 0.6095525228085084 H2_DX_Z = -0.656781187706823 H2_DY_X = -0.8960315909698124 H2_DY_Y = 0.30736453228754 H2_DY_Z = -0.32039730378980025 H2_DZ_X = 0.006572257748644006 H2_DZ_Y = 0.7307344019747823 H2_DZ_Z = 0.6826302360712155 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 1976 H3_OUTID2_ORIG = 1829 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -67.5658943690299 H3_P_Y = -11.701741559219274 H3_P_Z = 7.160609612426974 # Orientation: H3_DX_X = 0.8892926965734347 H3_DX_Y = 0.43395531244846985 H3_DX_Z = -0.14436511565781718 H3_DY_X = -0.38851498229310266 H3_DY_Y = 0.5503056669732462 H3_DY_Z = -0.7390668315050535 H3_DZ_X = -0.24127703652632704 H3_DZ_Y = 0.7133347458906538 H3_DZ_Z = 0.6579809510541992 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1772 H4_OUTID2_ORIG = 1979 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = -63.16501635379679 H4_P_Y = -22.162969089681194 H4_P_Z = -6.3450373050385975 # Orientation: H4_DX_X = 0.6994989268319998 H4_DX_Y = -0.3400822020156298 H4_DX_Z = 0.628526329785065 H4_DY_X = -0.7118513409137961 H4_DY_Y = -0.4091179225377317 H4_DY_Z = 0.5708679303461004 H4_DZ_X = 0.06299936348972324 H4_DZ_Y = -0.8467388152970265 H4_DZ_Z = -0.5282655192886239 ############# END of Description of junction: j53