############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS4 FINGERPRINT = 163 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1403 S1_NAME_ID3 = 1411 S1_NUM_ID5_ORIG = 1403 S1_NUM_ID3_ORIG = 1411 S1_NAME2_ID5 = 1405 S1_NAME2_ID3 = 1409 S1_NUM2_ID5_ORIG = 1405 S1_NUM2_ID3_ORIG = 1409 S1_SQ2 = GUCAC S1_SQLEN2 = 5 S1_SQ = GCGUCACAC S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1489 S2_NAME_ID3 = 1498 S2_NUM_ID5_ORIG = 1489 S2_NUM_ID3_ORIG = 1498 S2_NAME2_ID5 = 1491 S2_NAME2_ID3 = 1496 S2_NUM2_ID5_ORIG = 1491 S2_NUM2_ID3_ORIG = 1496 S2_SQ2 = GAAGUC S2_SQLEN2 = 6 S2_SQ = GUGAAGUCGC S2_SQLEN = 10 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 1405 H1_OUTID2_ORIG = 1496 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 4.658433556298349 H1_P_Y = -16.693519027024056 H1_P_Z = 35.90034876848097 # Orientation: H1_DX_X = 0.9873553348505011 H1_DX_Y = -0.06690379639131194 H1_DX_Z = 0.14371264652312732 H1_DY_X = -0.06236989372560853 H1_DY_Y = 0.6695059942285688 H1_DY_Z = 0.7401835718581395 H1_DZ_X = -0.1457375692774745 H1_DZ_Y = -0.7397875409335057 H1_DZ_Z = 0.6568675324452045 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 1491 H2_OUTID2_ORIG = 1409 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = 9.673899322261052 H2_P_Y = 0.6318510835871987 H2_P_Z = 17.07276086134715 # Orientation: H2_DX_X = -0.9673158448341486 H2_DX_Y = 0.14313084948767751 H2_DX_Z = -0.2093170233347763 H2_DY_X = 0.006828977703927208 H2_DY_Y = 0.8398703533078482 H2_DY_Z = 0.5427440968799822 H2_DZ_X = 0.25348258598237905 H2_DZ_Y = 0.5235755433168039 H2_DZ_Z = -0.8133973377410335 ############# END of Description of junction: j1