############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 28:40:42:42:61:65:66:76:91:99:101:105:120:125:130:130:133:143:143:157:164 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.96126234684432 H1_P_Y = 91.91449102143194 H1_P_Z = 80.91049871281447 # Orientation: H1_DX_X = 0.1394811769783857 H1_DX_Y = -0.9876646914231202 H1_DX_Z = 0.07115798328224798 H1_DY_X = 0.21273455911630634 H1_DY_Y = -0.04029461236689258 H1_DY_Z = -0.9762788288044533 H1_DZ_X = 0.9671034115472423 H1_DZ_Y = 0.15131028230187837 H1_DZ_Z = 0.2044900727258181 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 41.1660134410279 H2_P_Y = 84.0410087414316 H2_P_Z = 70.90126973230358 # Orientation: H2_DX_X = -0.42789872457117184 H2_DX_Y = 0.4419592655603992 H2_DX_Z = 0.7884000818719414 H2_DY_X = -0.33949284337649743 H2_DY_Y = 0.7298246697699398 H2_DY_Z = -0.593380620421101 H2_DZ_X = -0.8376438925978675 H2_DZ_Y = -0.5215629961763995 H2_DZ_Z = -0.16224903763345822 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.56342441142565 H3_P_Y = 89.96139980773917 H3_P_Z = 98.0699219482656 # Orientation: H3_DX_X = -0.22107184348374176 H3_DX_Y = 0.9166364315168778 H3_DX_Z = 0.3330238616596546 H3_DY_X = -0.7505169584596132 H3_DY_Y = -0.3779581902583544 H3_DY_Z = 0.5420995309730188 H3_DZ_X = 0.6227772756638075 H3_DZ_Y = -0.13009711308340854 H3_DZ_Z = 0.7715071004755174 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.046644921454174 H4_P_Y = 102.3306724302622 H4_P_Z = 103.90238216015698 # Orientation: H4_DX_X = -0.9832765415852549 H4_DX_Y = 0.16777272927761544 H4_DX_Z = 0.0708488114147201 H4_DY_X = -0.049889532795099 H4_DY_Y = -0.6222841050744279 H4_DY_Z = 0.7812000557406549 H4_DZ_X = 0.17515215467023637 H4_DZ_Y = 0.7646010749943173 H4_DZ_Z = 0.6202474658004746 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.126914554608913 H5_P_Y = 97.59792722521135 H5_P_Z = 94.07495114633136 # Orientation: H5_DX_X = -0.15891511977841688 H5_DX_Y = 0.9253987289733203 H5_DX_Z = -0.3440685645628889 H5_DY_X = -0.9702807945199279 H5_DY_Y = -0.08197174467869672 H5_DY_Z = 0.22767479627775344 H5_DZ_X = 0.18248606656838895 H5_DZ_Y = 0.37002408771441253 H5_DZ_Z = 0.9109231636200263 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.177454526196449 H6_P_Y = 90.30299319350617 H6_P_Z = 72.74879383802643 # Orientation: H6_DX_X = 0.7092609611495497 H6_DX_Y = -0.6543592066990556 H6_DX_Z = 0.26222684377729877 H6_DY_X = -0.7001765960770694 H6_DY_Y = -0.6971074251754459 H6_DY_Z = 0.15425294833873693 H6_DZ_X = 0.08186344297155124 H6_DZ_Y = -0.29301069327490836 H6_DZ_Z = -0.9525980843626627 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.991019266497233 H7_P_Y = 100.26757125568565 H7_P_Z = 77.38212490335076 # Orientation: H7_DX_X = 0.960038023296967 H7_DX_Y = -0.22203358071423906 H7_DX_Z = -0.17037629782126373 H7_DY_X = -0.27210178101682203 H7_DY_Y = -0.8829346907285185 H7_DY_Z = -0.3826054791500155 H7_DZ_X = -0.06547987928772869 H7_DZ_Y = 0.4136755019859919 H7_DZ_Z = -0.9080666079452016 ############# END of Description of junction: j13