############# Start of Description of junction: j81 # Number of strands: NUM_STRANDS = 6 LILLEY = 2HS2HS9HS12HS3HS2 FINGERPRINT = 8:27:33:40:44:65:116:142:143:143:146:150:152:160:166 LOOP_LENGTH_SUM = 28 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2220 S1_NAME_ID3 = 2226 S1_NUM_ID5_ORIG = 2220 S1_NUM_ID3_ORIG = 2226 S1_NAME2_ID5 = 2221 S1_NAME2_ID3 = 2225 S1_NUM2_ID5_ORIG = 2221 S1_NUM2_ID3_ORIG = 2225 S1_SQ2 = GUUUG S1_SQLEN2 = 5 S1_SQ = AGUUUGA S1_SQLEN = 7 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2056 S2_NAME_ID3 = 2061 S2_NUM_ID5_ORIG = 2056 S2_NUM_ID3_ORIG = 2061 S2_NAME2_ID5 = 2057 S2_NAME2_ID3 = 2060 S2_NUM2_ID5_ORIG = 2057 S2_NUM2_ID3_ORIG = 2060 S2_SQ2 = UUUA S2_SQLEN2 = 4 S2_SQ = CUUUAC S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2236 S3_NAME_ID3 = 2239 S3_NUM_ID5_ORIG = 2236 S3_NUM_ID3_ORIG = 2239 S3_NAME2_ID5 = 2237 S3_NAME2_ID3 = 2238 S3_NUM2_ID5_ORIG = 2237 S3_NUM2_ID3_ORIG = 2238 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = UCGC S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2259 S4_NAME_ID3 = 2264 S4_NUM_ID5_ORIG = 2259 S4_NUM_ID3_ORIG = 2264 S4_NAME2_ID5 = 2260 S4_NAME2_ID3 = 2263 S4_NUM2_ID5_ORIG = 2260 S4_NUM2_ID3_ORIG = 2263 S4_SQ2 = CGCC S4_SQLEN2 = 4 S4_SQ = GCGCCC S4_SQLEN = 6 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2362 S5_NAME_ID3 = 2374 S5_NUM_ID5_ORIG = 2362 S5_NUM_ID3_ORIG = 2374 S5_NAME2_ID5 = 2363 S5_NAME2_ID3 = 2373 S5_NUM2_ID5_ORIG = 2363 S5_NUM2_ID3_ORIG = 2373 S5_SQ2 = GCUUAGUGAAC S5_SQLEN2 = 11 S5_SQ = GGCUUAGUGAACC S5_SQLEN = 13 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 2400 S6_NAME_ID3 = 2415 S6_NUM_ID5_ORIG = 2400 S6_NUM_ID3_ORIG = 2415 S6_NAME2_ID5 = 2401 S6_NAME2_ID3 = 2414 S6_NUM2_ID5_ORIG = 2401 S6_NUM2_ID3_ORIG = 2414 S6_SQ2 = AUCAACGGAUAAAA S6_SQLEN2 = 14 S6_SQ = GAUCAACGGAUAAAAG S6_SQLEN = 16 S6_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2221 H1_OUTID2_ORIG = 2060 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.519912479937425 H1_P_Y = 159.3941246877924 H1_P_Z = 102.29604352363455 # Orientation: H1_DX_X = 1.0800913976538595E-4 H1_DX_Y = -0.2744853392857465 H1_DX_Z = -0.9615912784812508 H1_DY_X = -0.9352622977887037 H1_DY_Y = 0.3403326985068702 H1_DY_Z = -0.09725270516558737 H1_DZ_X = 0.3539553964400355 H1_DZ_Y = 0.8993505728269895 H1_DZ_Z = -0.2566790300877102 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 2237 H2_OUTID2_ORIG = 2225 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 64.38139326749284 H2_P_Y = 135.37398006383398 H2_P_Z = 90.74456756173423 # Orientation: H2_DX_X = -0.9176093994239523 H2_DX_Y = -0.09925666706791958 H2_DX_Z = -0.3848910289047893 H2_DY_X = 0.33886397302981663 H2_DY_Y = -0.7014759516931974 H2_DY_Z = -0.6269790243529485 H2_DZ_X = -0.2077599525203908 H2_DZ_Y = -0.7057475492261176 H2_DZ_Z = 0.677315435295867 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2260 H3_OUTID2_ORIG = 2238 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 69.99445042883067 H3_P_Y = 128.25897597216627 H3_P_Z = 73.34255675820097 # Orientation: H3_DX_X = -0.6437753550490726 H3_DX_Y = 0.5452629409252836 H3_DX_Z = -0.5368813812053475 H3_DY_X = 0.6543181449282685 H3_DY_Y = 0.028466143833071555 H3_DY_Z = -0.7556834283434455 H3_DZ_X = -0.3967632259283391 H3_DZ_Y = -0.8377815967833158 H3_DZ_Z = -0.37510123785737903 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 2363 H4_OUTID2_ORIG = 2263 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 71.98701264627229 H4_P_Y = 148.9418580679658 H4_P_Z = 56.47267331614067 # Orientation: H4_DX_X = 0.9654927649704206 H4_DX_Y = -0.24380246558584417 H4_DX_Z = -0.09156461414781347 H4_DY_X = -0.14151099728510985 H4_DY_Y = -0.19597249973776343 H4_DY_Z = -0.9703449989534221 H4_DZ_X = 0.2186283568916565 H4_DZ_Y = 0.9498184758788284 H4_DZ_Z = -0.22371076067560125 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 13 H5_INID2 = 2 H5_OUTID2 = 12 H5_INID2_ORIG = 2401 H5_OUTID2_ORIG = 2373 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 55.29585941876486 H5_P_Y = 155.24096784062726 H5_P_Z = 63.125799669078056 # Orientation: H5_DX_X = -0.4354360661506931 H5_DX_Y = 0.27303370014200823 H5_DX_Z = 0.8578158490503469 H5_DY_X = 0.8473862037448825 H5_DY_Y = 0.44595786245960767 H5_DY_Z = 0.2881982071652871 H5_DZ_X = -0.303861899549851 H5_DZ_Y = 0.8523932094387021 H5_DZ_Z = -0.42555112795614036 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 16 H6_INID2 = 2 H6_OUTID2 = 15 H6_INID2_ORIG = 2057 H6_OUTID2_ORIG = 2414 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 53.19353372717468 H6_P_Y = 146.62781791770118 H6_P_Z = 100.88459626845356 # Orientation: H6_DX_X = 0.9824529069938208 H6_DX_Y = -0.15129624244141837 H6_DX_Z = -0.10906755962471948 H6_DY_X = 0.10664293339931419 H6_DY_Y = -0.02407290857988187 H6_DY_Z = 0.994005925449386 H6_DZ_X = -0.15301493487687878 H6_DZ_Y = -0.9881952955239228 H6_DZ_Z = -0.007515823907866093 ############# END of Description of junction: j81