############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 15:18:156:162:167:175 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 98.13360242021201 H1_P_Y = 139.31548275722113 H1_P_Z = 91.68253012213374 # Orientation: H1_DX_X = -0.16036795838589057 H1_DX_Y = 0.26168917526192104 H1_DX_Z = -0.95173572669826 H1_DY_X = -0.4829047809130884 H1_DY_Y = -0.861742098540617 H1_DY_Z = -0.15557483142870865 H1_DZ_X = -0.8608629917091548 H1_DZ_Y = 0.4346485144959331 H1_DZ_Z = 0.26456677484532065 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 110.68855463987515 H2_P_Y = 129.87019505022184 H2_P_Z = 77.83670080301364 # Orientation: H2_DX_X = 0.6657260202349704 H2_DX_Y = 0.580104973421868 H2_DX_Z = 0.46934751069260017 H2_DY_X = 0.21737500325332348 H2_DY_Y = -0.7524733202068035 H2_DY_Z = 0.6217169857238787 H2_DZ_X = 0.7138325951809179 H2_DZ_Y = -0.3118687579546986 H2_DZ_Z = -0.6270413892790998 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.53263676641872 H3_P_Y = 129.1624508759156 H3_P_Z = 92.97714404927873 # Orientation: H3_DX_X = 0.5208674164695424 H3_DX_Y = 0.8341336227524323 H3_DX_Z = -0.181433827756166 H3_DY_X = 0.5154871457017549 H3_DY_Y = -0.1379368944614896 H3_DY_Z = 0.8457224224073485 H3_DZ_X = 0.6804190892946593 H3_DZ_Y = -0.534036059213463 H3_DZ_Z = -0.5018319941805061 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 104.24533507498192 H4_P_Y = 139.31408873127054 H4_P_Z = 103.8791144252718 # Orientation: H4_DX_X = -0.3642419294522483 H4_DX_Y = 0.4804540667900028 H4_DX_Z = -0.7978043034064513 H4_DY_X = -0.5342609751902359 H4_DY_Y = -0.8094711744295751 H4_DY_Z = -0.2435603172858123 H4_DZ_X = -0.7628191313920212 H4_DZ_Y = 0.33752082524270577 H4_DZ_Z = 0.5515312006675686 ############# END of Description of junction: j53