############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 29:39:41:42:62:64:66:76:92:101:101:105:119:123:130:131:134:143:143:156:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 58.36886816095773 H1_P_Y = 92.25439993172162 H1_P_Z = 81.16465439625581 # Orientation: H1_DX_X = 0.12782437949304182 H1_DX_Y = -0.9901946948397864 H1_DX_Z = 0.05635063724888312 H1_DY_X = 0.221972117755584 H1_DY_Y = -0.02681354612597886 H1_DY_Z = -0.9746842630735557 H1_DZ_X = 0.9666381468503715 H1_DZ_Y = 0.13709668141601128 H1_DZ_Z = 0.21636818850836903 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.98130307253661 H2_P_Y = 84.28381816367857 H2_P_Z = 70.96407983009848 # Orientation: H2_DX_X = -0.41461886365416944 H2_DX_Y = 0.42638155900820607 H2_DX_Z = 0.8039216156067965 H2_DY_X = -0.3628791303301213 H2_DY_Y = 0.732685216822702 H2_DY_Z = -0.5757526463858653 H2_DZ_X = -0.8345117942084386 H2_DZ_Y = -0.5304442847153723 H2_DZ_Z = -0.14906014269352852 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.64251766245334 H3_P_Y = 90.35015131037835 H3_P_Z = 98.24718798240885 # Orientation: H3_DX_X = -0.21110588166919797 H3_DX_Y = 0.9155030105813609 H3_DX_Z = 0.34247415134741743 H3_DY_X = -0.7614272083020239 H3_DY_Y = -0.37372175434131805 H3_DY_Z = 0.5296797681518797 H3_DZ_X = 0.6129134630452029 H3_DZ_Y = -0.14895062251802926 H3_DZ_Z = 0.7759837619882433 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.30949879720306 H4_P_Y = 102.6949778182606 H4_P_Z = 104.37158926667392 # Orientation: H4_DX_X = -0.9836666569070331 H4_DX_Y = 0.17139786993548967 H4_DX_Z = 0.05497888932046635 H4_DY_X = -0.06319174839846653 H4_DY_Y = -0.6148266673119593 H4_DY_Z = 0.7861265623908196 H4_DZ_X = 0.16854290558691076 H4_DZ_Y = 0.7698122753916437 H4_DZ_Z = 0.6156154234850391 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.291791257177849 H5_P_Y = 97.92085465794646 H5_P_Z = 94.50554906968628 # Orientation: H5_DX_X = -0.12008958103091061 H5_DX_Y = 0.932568374305859 H5_DX_Z = -0.3404331355381629 H5_DY_X = -0.9744104231448212 H5_DY_Y = -0.04509138787429379 H5_DY_Z = 0.22020693451001705 H5_DZ_X = 0.1900074203670723 H5_DZ_Y = 0.35816615415767217 H5_DZ_Z = 0.9141193500967688 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.32959563437186 H6_P_Y = 90.97306845164603 H6_P_Z = 73.13351904599423 # Orientation: H6_DX_X = 0.7000241400294112 H6_DX_Y = -0.6710106497997401 H6_DX_Z = 0.2443581617859678 H6_DY_X = -0.7114000580327069 H6_DY_Y = -0.6850941941422093 H6_DY_Z = 0.15670323092936655 H6_DZ_X = 0.06225882111918857 H6_DZ_Y = -0.2835324549464673 H6_DZ_Z = -0.9569394893016323 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 31.192061107131252 H7_P_Y = 100.52806544805449 H7_P_Z = 77.98987206086666 # Orientation: H7_DX_X = 0.958850351944541 H7_DX_Y = -0.2304600444964109 H7_DX_Z = -0.1658136618815007 H7_DY_X = -0.2779070453518635 H7_DY_Y = -0.8813486923742886 H7_DY_Z = -0.38208919978706035 H7_DZ_X = -0.058083360092513914 H7_DZ_Y = 0.41244714854249764 H7_DZ_Z = -0.9091279739066067 ############# END of Description of junction: j13