############# Start of Description of junction: j16 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS2HS8HS2HS4 FINGERPRINT = 60:65:91:95:102:105:108:125:153:153 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 680 S1_NAME_ID3 = 685 S1_NUM_ID5_ORIG = 680 S1_NUM_ID3_ORIG = 685 S1_NAME2_ID5 = 681 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 681 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = UAGACU S1_SQLEN = 6 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 592 S2_NAME_ID3 = 599 S2_NUM_ID5_ORIG = 592 S2_NUM_ID3_ORIG = 599 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = CGACUU S2_SQLEN2 = 6 S2_SQ = GCGACUUA S2_SQLEN = 8 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 821 S3_NAME_ID3 = 826 S3_NUM_ID5_ORIG = 821 S3_NUM_ID3_ORIG = 826 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = AGUUCU S3_SQLEN = 6 S3_CHAR = B ## Properties of strand 4 S4_NAME_ID5 = 1208 S4_NAME_ID3 = 1213 S4_NUM_ID5_ORIG = 1208 S4_NUM_ID3_ORIG = 1213 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1212 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1212 S4_SQ2 = GCGU S4_SQLEN2 = 4 S4_SQ = AGCGUU S4_SQLEN = 6 S4_CHAR = B ## Properties of strand 5 S5_NAME_ID5 = 1259 S5_NAME_ID3 = 1270 S5_NUM_ID5_ORIG = 1259 S5_NUM_ID3_ORIG = 1270 S5_NAME2_ID5 = 1260 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1260 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = AGUGCGGAUG S5_SQLEN2 = 10 S5_SQ = AAGUGCGGAUGC S5_SQLEN = 12 S5_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 681 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = -881.1708558113211 H1_P_Y = -24.410080920011897 H1_P_Z = 72.46259690445929 # Orientation: H1_DX_X = -0.4288516105408462 H1_DX_Y = 0.507953495553874 H1_DX_Z = 0.7470405226566612 H1_DY_X = 0.7020627728179534 H1_DY_Y = 0.7078035914324161 H1_DY_Z = -0.07824282061982046 H1_DZ_X = -0.5685016791177304 H1_DZ_Y = 0.4909147811076089 H1_DZ_Z = -0.6601579496835086 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = -867.7711212312952 H2_P_Y = -38.49329585415689 H2_P_Z = 80.65001965034944 # Orientation: H2_DX_X = -0.796059160767868 H2_DX_Y = 0.3434697303656691 H2_DX_Z = 0.49831551940511076 H2_DY_X = -0.017653124890443905 H2_DY_Y = -0.8361913238612431 H2_DY_Z = 0.5481536619240899 H2_DZ_X = 0.6049613043319368 H2_DZ_Y = 0.42756591798424637 H2_DZ_Z = 0.6717210775606333 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = -890.1687788325556 H3_P_Y = -43.567296367239045 H3_P_Z = 67.99400171305125 # Orientation: H3_DX_X = -0.27973392421802146 H3_DX_Y = -0.7434268021201902 H3_DX_Z = 0.607507630841738 H3_DY_X = -0.7598718793335593 H3_DY_Y = -0.21531471436365734 H3_DY_Z = -0.6133794101341579 H3_DZ_X = 0.5868080253708285 H3_DZ_Y = -0.6332109945885804 H3_DZ_Z = -0.5046782912831986 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1260 H4_OUTID2_ORIG = 1212 H4_INSEQ_CHAR = B H4_OUTSEQ_CHAR = B # Position: H4_P_X = -904.7279639276769 H4_P_Y = -35.01663722474096 H4_P_Z = 79.78560025662328 # Orientation: H4_DX_X = 0.2373976176204451 H4_DX_Y = -0.133891904988225 H4_DX_Z = 0.9621410130156391 H4_DY_X = 0.3810869378138477 H4_DY_Y = 0.9238937733252826 H4_DY_Z = 0.03454043193713119 H4_DZ_X = -0.8935407752171614 H4_DZ_Y = 0.3584595561418169 H4_DZ_Z = 0.27035463679183636 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 12 H5_INID2 = 2 H5_OUTID2 = 11 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = B H5_OUTSEQ_CHAR = B # Position: H5_P_X = -881.1959740949605 H5_P_Y = -51.059594683200544 H5_P_Z = 95.23782624978521 # Orientation: H5_DX_X = 0.6391299621562894 H5_DX_Y = 0.6969889811895129 H5_DX_Z = 0.3251449700894824 H5_DY_X = -0.7563656606679388 H5_DY_Y = 0.4930074765219672 H5_DY_Z = 0.42994722403553 H5_DZ_X = 0.1393695764381846 H5_DZ_Y = -0.520720643141594 H5_DZ_Z = 0.8422743810479147 ############# END of Description of junction: j16