############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:40:43:43:61:67:67:75:92:100:101:104:118:124:130:131:134:144:144:156:166 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 58.207334466671966 H1_P_Y = 91.8967642425938 H1_P_Z = 81.06543296752032 # Orientation: H1_DX_X = 0.1250689798112674 H1_DX_Y = -0.9895503735994424 H1_DX_Z = 0.07174822923367685 H1_DY_X = 0.21242874490283725 H1_DY_Y = -0.043930613583469835 H1_DY_Z = -0.9761885727302797 H1_DZ_X = 0.9691397105825246 H1_DZ_Y = 0.13733229517990253 H1_DZ_Z = 0.2047145868584863 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 41.4246213062959 H2_P_Y = 84.01314810829042 H2_P_Z = 70.9341996065765 # Orientation: H2_DX_X = -0.4255806508871629 H2_DX_Y = 0.4266246527070052 H2_DX_Z = 0.7980429282269768 H2_DY_X = -0.35607074877723477 H2_DY_Y = 0.7318038802293216 H2_DY_Z = -0.5810995635401071 H2_DZ_X = -0.8319223109495724 H2_DZ_Y = -0.5314644734917948 H2_DZ_Z = -0.15953301213353654 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.62043980129058 H3_P_Y = 90.03733674745214 H3_P_Z = 98.12839948764649 # Orientation: H3_DX_X = -0.20770265995680148 H3_DX_Y = 0.9211097466920108 H3_DX_Z = 0.3292665175748226 H3_DY_X = -0.7684090324023884 H3_DY_Y = -0.36193384824291286 H3_DY_Z = 0.5277797347554269 H3_DZ_X = 0.6053157555931534 H3_DZ_Y = -0.14339011139217916 H3_DZ_Z = 0.7829636722004665 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.29666819073802 H4_P_Y = 102.31635040123629 H4_P_Z = 104.43360079631819 # Orientation: H4_DX_X = -0.9832678851341328 H4_DX_Y = 0.17387263879048476 H4_DX_Z = 0.054337570279599845 H4_DY_X = -0.06620294916605474 H4_DY_Y = -0.6189650638128086 H4_DY_Z = 0.7826234211298129 H4_DZ_X = 0.16970985706662134 H4_DZ_Y = 0.7659311687477128 H4_DZ_Z = 0.6201193507343419 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.499972107682549 H5_P_Y = 97.62166380459658 H5_P_Z = 94.15004736529426 # Orientation: H5_DX_X = -0.15457306379585845 H5_DX_Y = 0.9313632968766399 H5_DX_Z = -0.3296506896395641 H5_DY_X = -0.9744990664249276 H5_DY_Y = -0.08879252580490515 H5_DY_Z = 0.20607633755025745 H5_DZ_X = 0.16266141978265303 H5_DZ_Y = 0.35309814017107044 H5_DZ_Z = 0.9213375960645607 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.51038693044812 H6_P_Y = 90.64997770353449 H6_P_Z = 72.80029615103358 # Orientation: H6_DX_X = 0.7102475885753119 H6_DX_Y = -0.6547977029359089 H6_DX_Z = 0.25843438461787116 H6_DY_X = -0.7003591146095314 H6_DY_Y = -0.694325644881431 H6_DY_Z = 0.16555666535458613 H6_DZ_X = 0.07103149657943497 H6_DZ_Y = -0.29858309913630876 H6_DZ_Z = -0.9517366544395855 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 31.311643588736167 H7_P_Y = 100.42257057234168 H7_P_Z = 77.76290932216749 # Orientation: H7_DX_X = 0.9627888538156668 H7_DX_Y = -0.21502704684401408 H7_DX_Z = -0.16371008549822363 H7_DY_X = -0.2637117200761878 H7_DY_Y = -0.8799801561414284 H7_DY_Z = -0.39508360316744984 H7_DZ_X = -0.05910796615306424 H7_DZ_Y = 0.4235543576955081 H7_DZ_Z = -0.9039402382980768 ############# END of Description of junction: j13