############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS5HS6 FINGERPRINT = 145 LOOP_LENGTH_SUM = 11 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1003 S1_NAME_ID3 = 1014 S1_NUM_ID5_ORIG = 1003 S1_NUM_ID3_ORIG = 1014 S1_NAME2_ID5 = 1005 S1_NAME2_ID3 = 1012 S1_NUM2_ID5_ORIG = 1005 S1_NUM2_ID3_ORIG = 1012 S1_SQ2 = UCAGCUAA S1_SQLEN2 = 8 S1_SQ = CAUCAGCUAAGG S1_SQLEN = 12 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1163 S2_NAME_ID3 = 1173 S2_NUM_ID5_ORIG = 1163 S2_NUM_ID3_ORIG = 1173 S2_NAME2_ID5 = 1165 S2_NAME2_ID3 = 1171 S2_NUM2_ID5_ORIG = 1165 S2_NUM2_ID3_ORIG = 1171 S2_SQ2 = GAAGCUA S2_SQLEN2 = 7 S2_SQ = CCGAAGCUAUG S2_SQLEN = 11 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1005 H1_OUTID2_ORIG = 1171 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 18.210029543093185 H1_P_Y = 90.68481802883922 H1_P_Z = 69.66383983896372 # Orientation: H1_DX_X = -0.8669064026982127 H1_DX_Y = -0.4864071930691978 H1_DX_Z = 0.10900152059207358 H1_DY_X = -0.2700835091978462 H1_DY_Y = 0.6421348165007714 H1_DY_Z = 0.7174383426447832 H1_DZ_X = -0.4189608418697617 H1_DZ_Y = 0.5925123795905591 H1_DZ_Z = -0.6880413454231729 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 3 H2_OUTID2 = 10 H2_INID2_ORIG = 1165 H2_OUTID2_ORIG = 1012 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 43.26070766462737 H2_P_Y = 72.65205683838792 H2_P_Z = 77.01219200542111 # Orientation: H2_DX_X = 0.03645216221968184 H2_DX_Y = 0.40365947770463606 H2_DX_Z = 0.9141828405350481 H2_DY_X = -0.6092137550166967 H2_DY_Y = -0.7161737125395717 H2_DY_Z = 0.3405199174288356 H2_DZ_X = 0.7921678108633046 H2_DZ_Y = -0.5693454483233324 H2_DZ_Z = 0.21980882581355843 ############# END of Description of junction: j9