############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS12HS3HS4 FINGERPRINT = 29:69:78:86:102:103:126:154:155:169 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 113 S1_NAME_ID3 = 121 S1_NUM_ID5_ORIG = 113 S1_NUM_ID3_ORIG = 121 S1_NAME2_ID5 = 115 S1_NAME2_ID3 = 119 S1_NUM2_ID5_ORIG = 115 S1_NUM2_ID3_ORIG = 119 S1_SQ2 = GAAUG S1_SQLEN2 = 5 S1_SQ = CCGAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 45 S2_NAME_ID3 = 54 S2_NUM_ID5_ORIG = 45 S2_NUM_ID3_ORIG = 54 S2_NAME2_ID5 = 47 S2_NAME2_ID3 = 52 S2_NUM2_ID5_ORIG = 47 S2_NUM2_ID3_ORIG = 52 S2_SQ2 = GAUGAA S2_SQLEN2 = 6 S2_SQ = CCGAUGAAGG S2_SQLEN = 10 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 126 S3_NAME_ID3 = 131 S3_NUM_ID5_ORIG = 126 S3_NUM_ID3_ORIG = 131 S3_NAME2_ID5 = 128 S3_NAME2_ID3 = 129 S3_NUM2_ID5_ORIG = 128 S3_NUM2_ID3_ORIG = 129 S3_SQ2 = CA S3_SQLEN2 = 2 S3_SQ = CCCACC S3_SQLEN = 6 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 140 S4_NAME_ID3 = 146 S4_NUM_ID5_ORIG = 140 S4_NUM_ID3_ORIG = 146 S4_NAME2_ID5 = 142 S4_NAME2_ID3 = 144 S4_NUM2_ID5_ORIG = 142 S4_NUM2_ID3_ORIG = 144 S4_SQ2 = UAU S4_SQLEN2 = 3 S4_SQ = GGUAUCC S4_SQLEN = 7 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 151 S5_NAME_ID3 = 156 S5_NUM_ID5_ORIG = 151 S5_NUM_ID3_ORIG = 156 S5_NAME2_ID5 = 153 S5_NAME2_ID3 = 154 S5_NUM2_ID5_ORIG = 153 S5_NUM2_ID3_ORIG = 154 S5_SQ2 = AU S5_SQLEN2 = 2 S5_SQ = GGAUGG S5_SQLEN = 6 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 115 H1_OUTID2_ORIG = 52 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -1.362145060656097 H1_P_Y = 163.93992852472212 H1_P_Z = 123.84976891578674 # Orientation: H1_DX_X = 0.8267009909200147 H1_DX_Y = -0.550539619281011 H1_DX_Z = -0.1160672185149565 H1_DY_X = 0.28447218820320375 H1_DY_Y = 0.23101045714281554 H1_DY_Z = 0.9304352437593622 H1_DZ_X = -0.48542872365647716 H1_DZ_Y = -0.8022096336323727 H1_DZ_Z = 0.3475897840222615 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 128 H2_OUTID2_ORIG = 119 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 11.382000387112907 H2_P_Y = 172.4633245720825 H2_P_Z = 129.21634402852342 # Orientation: H2_DX_X = 0.7444973556828209 H2_DX_Y = 0.47629188679553636 H2_DX_Z = 0.467835148267028 H2_DY_X = 0.12400499793611885 H2_DY_Y = -0.7872040979243593 H2_DY_Z = 0.6040964067911148 H2_DZ_X = 0.6560079632657985 H2_DZ_Y = -0.39173428083819317 H2_DZ_Z = -0.6451339437264494 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 3 H3_OUTID2 = 4 H3_INID2_ORIG = 142 H3_OUTID2_ORIG = 129 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -0.015054769855392891 H3_P_Y = 184.31916864977657 H3_P_Z = 138.79906838046622 # Orientation: H3_DX_X = 0.580641646151381 H3_DX_Y = 0.7973208073527758 H3_DX_Z = -0.16472646695942217 H3_DY_X = -0.6229819347492339 H3_DY_Y = 0.3048485024010006 H3_DY_Z = -0.720389408278578 H3_DZ_X = -0.5241648478586569 H3_DZ_Y = 0.5209097049836657 H3_DZ_Z = 0.6737241954413662 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 7 H4_INID2 = 3 H4_OUTID2 = 5 H4_INID2_ORIG = 153 H4_OUTID2_ORIG = 144 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 8.748360252442337 H4_P_Y = 193.32047705565785 H4_P_Z = 116.46535660200443 # Orientation: H4_DX_X = 0.7134596922316891 H4_DX_Y = -0.19341106929897478 H4_DX_Z = -0.6734741463733371 H4_DY_X = -0.667333754196223 H4_DY_Y = 0.1054904369046028 H4_DY_Z = -0.7372499089400151 H4_DZ_X = 0.21363737517353165 H4_DZ_Y = 0.9754301235836067 H4_DZ_Z = -0.05380656033105424 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 6 H5_INID2 = 3 H5_OUTID2 = 4 H5_INID2_ORIG = 47 H5_OUTID2_ORIG = 154 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 10.51129008330954 H5_P_Y = 171.09940480409844 H5_P_Z = 103.58097868407982 # Orientation: H5_DX_X = -0.02332485572718923 H5_DX_Y = -0.3867577202991015 H5_DX_Z = 0.9218863362119833 H5_DY_X = -0.8065655511644696 H5_DY_Y = -0.5375601775076291 H5_DY_Z = -0.24592898819115305 H5_DZ_X = 0.5906843173642358 H5_DZ_Y = -0.7492980190465062 H5_DZ_Z = -0.2994069402550963 ############# END of Description of junction: j2