############# Start of Description of junction: j12 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:41:41:42:63:63:64:76:91:102:102:104:119:124:130:131:134:142:143:158:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.65420225047873 H1_P_Y = 91.29400946968234 H1_P_Z = 80.91606486749772 # Orientation: H1_DX_X = 0.15154180111937166 H1_DX_Y = -0.9865810791688006 H1_DX_Z = 0.06076887969688016 H1_DY_X = 0.2394851009593708 H1_DY_Y = -0.0230005889371796 H1_DY_Z = -0.9706275595340514 H1_DZ_X = 0.9590005051781674 H1_DZ_Y = 0.16164388987728273 H1_DZ_Z = 0.23278591867499188 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 41.10964258120862 H2_P_Y = 83.39042856153694 H2_P_Z = 70.61925258937998 # Orientation: H2_DX_X = -0.4086724808504698 H2_DX_Y = 0.4198261611778378 H2_DX_Z = 0.810390521777137 H2_DY_X = -0.3604836574547363 H2_DY_Y = 0.7414793889026186 H2_DY_Z = -0.565915054173928 H2_DZ_X = -0.8384738136063561 H2_DZ_Y = -0.5234064483967558 H2_DZ_Z = -0.15168175128575 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.17580534209301 H3_P_Y = 89.39836504647137 H3_P_Z = 97.77653992343832 # Orientation: H3_DX_X = -0.1885898565533779 H3_DX_Y = 0.9184660459895895 H3_DX_Z = 0.34764060230278915 H3_DY_X = -0.753495121511051 H3_DY_Y = -0.36235561199002575 H3_DY_Z = 0.5485831863248904 H3_DZ_X = 0.6298245532401978 H3_DZ_Y = -0.15848827345770644 H3_DZ_Z = 0.7603962778132143 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 32.95878341172561 H4_P_Y = 101.836686986516 H4_P_Z = 104.02039445927339 # Orientation: H4_DX_X = -0.9834237596903428 H4_DX_Y = 0.1713547306034826 H4_DX_Z = 0.05928967175086086 H4_DY_X = -0.05805615372617723 H4_DY_Y = -0.6073376260922174 H4_DY_Z = 0.792319689864641 H4_DZ_X = 0.17177657550154635 H4_DZ_Y = 0.7757438779858177 H4_DZ_Z = 0.6072184482346472 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.036319372162929 H5_P_Y = 96.87509051383465 H5_P_Z = 94.10426116730639 # Orientation: H5_DX_X = -0.13468121440930858 H5_DX_Y = 0.9320018435031443 H5_DX_Z = -0.33650190815501446 H5_DY_X = -0.9724578828458288 H5_DY_Y = -0.0591264271126164 H5_DY_Z = 0.22545450030528968 H5_DZ_X = 0.19022785436482437 H5_DZ_Y = 0.35759841907317025 H5_DZ_Z = 0.9142957585486897 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.05603532616076 H6_P_Y = 89.87935077637037 H6_P_Z = 72.59944607789487 # Orientation: H6_DX_X = 0.7108214645693955 H6_DX_Y = -0.6638071868673023 H6_DX_Z = 0.2325787268232915 H6_DY_X = -0.7011927355337626 H6_DY_Y = -0.6947701964439403 H6_DY_Z = 0.16007223921694447 H6_DZ_X = 0.05533166491355779 H6_DZ_Y = -0.2768652972052763 H6_DZ_Z = -0.9593143458019 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.676327306561866 H7_P_Y = 99.65987623326055 H7_P_Z = 77.42608836627004 # Orientation: H7_DX_X = 0.9625391267421755 H7_DX_Y = -0.20991748664245335 H7_DX_Z = -0.17161899164175054 H7_DY_X = -0.2621378604025075 H7_DY_Y = -0.8822107826802323 H7_DY_Z = -0.3911366475623623 H7_DZ_X = -0.06929770294901161 H7_DZ_Y = 0.4214721624549327 H7_DZ_Z = -0.9041897171730966 ############# END of Description of junction: j12