RNAJunction Database - Junction Profile:9894
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9894: 2AVY_j4_A-U955_A-U960_A-G973_A-G1221

Primary Citation: (from PDB entry 2AVY)

B.S.SCHUWIRTH M.A.BOROVINSKAYA C.W.HAU W.ZHANG A.VILA- SANJURJO J.M.HOLTON J.H.D.CATE STRUCTURES OF THE BACTERIAL RIBOSOME AT 3.5 A RESOLUTION SCIENCE V. 310 827 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2AW7 j4 A-U955 A-U960 A-G973 A-G1221 
NC-IUBMB Classification:Cluster Page
Angles: 64:85:88:110:121:173°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.91727Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AUUCG 5nt

Strand 2: Chain A: GUUU 4nt

Strand 3: Chain A: CGAAGAACCUUACC 14nt

Strand 4: Chain A: GGGCUAC 7nt

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