RNAJunction Database - Junction Profile:7837
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7837: 1VS5_j4_A-G115_A-U239_A-C286_A-C311

Primary Citation: (from PDB entry 1VS5)

B.S.SCHUWIRTH A.VILA-SANJURJO J.H.D.CATE STRUCTURAL ANALYSIS OF KASUGAMYCIN INHIBITION OF TRANSLATION. NAT.STRUCT.MOL.BIOL. V. 13 879 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2I2U j4 A-G115 A-U239 A-C286 A-C311 
NC-IUBMB Classification:Cluster Page
Angles: 59:66:106:113:128:170°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.61563Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAUGGG 6nt

Strand 2: Chain A: GUGAGUAAUGUC 12nt

Strand 3: Chain A: CCCUAGCU 8nt

Strand 4: Chain A: AGCCAC 6nt

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