RNAJunction Database - Junction Profile:6249
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6249: 1VOX_j4_A-G115_A-U239_A-G286_A-C311

Primary Citation: (from PDB entry 1VOX)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2J02 j4 A-G115 A-U239 A-G286 A-C311 
NC-IUBMB Classification:Cluster Page
Angles: 64:68:96:109:128:162°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.72326Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCC 6nt

Strand 2: Chain A: GUGAGUAACGCG 12nt

Strand 3: Chain A: GGGUAGCC 8nt

Strand 4: Chain A: GGCCAC 6nt

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