RNAJunction Database - Junction Profile:5946
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5946: 1VOR_j2_B-C298_B-C354

Primary Citation: (from PDB entry 1VOR)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VOY j2 B-C298 B-C354 
NC-IUBMB Classification:HS7HS9Cluster Page
Angles: 166°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 2.00043Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GGCGAACGAGCGGUU 15nt

Strand 2: Chain B: AACCCCUCAAGCC 13nt

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