RNAJunction Database - Junction Profile:2915
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2915: 1M1K_j7_A-A912_A-G928_A-U1041_A-C1069_A-A1086_A-C1267_A-A1286

Primary Citation: (from PDB entry 1M1K)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:7-wayCluster:1KC8 j7 A-A912 A-G928 A-U1041 A-C1069 A-A1086 A-C1267 A-A1286 
NC-IUBMB Classification:Cluster Page
Angles: 30:40:42:42:62:63:64:77:91:100:103:104:119:123:130:131:134:141:145:156:163°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.60924Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AUGACC 6nt

Strand 2: Chain A: CGAAACAU 8nt

Strand 3: Chain A: GAUUCCGGU 9nt

Strand 4: Chain A: ACCAGGAGG 9nt

Strand 5: Chain A: CCAGAGAU 8nt

Strand 6: Chain A: GUCCGUAC 8nt

Strand 7: Chain A: GUAAUCGAGUAG 12nt

Valid XHTML 1.0 Transitional